Published Journal Articles
2024
Mutations in the TP53, VEGFA, and CTH Genes as Key Molecular Markers for the Diagnosis of Glioblastoma
2024-05
Cureus
Background
Brain cancer, particularly glioblastoma (GBM), is a global health problem. Despite therapy advances, GBM
patients have a poor prognosis. The progression and etiology of GBM may be linked to gene polymorphisms
in the VEGFA, TP53, and CTH genes, among others. However, the genetic variations and their interaction in
GBM are not fully understood. This study examines the effects of mutations in the VEGFA, TP53, and CTH
genes on GBM.
Methodology
Tissue and blood samples were obtained for hematological, biochemical, and genetic analysis from 18
patients diagnosed with GBM as well as 28 healthy individuals. Standard methods were adopted to perform
hematological and biochemical analyses, whereas mutational landscape and expression profiles were
obtained from publicly accessible databases. Tissue samples were processed for genomic DNA extraction, and
genotype determination was carried out through conventional polymerase chain reaction (PCR) and Sanger
sequencing.
Results
The study involved 18 patients with grade IV GBM before treatment and 28 healthy individuals. The patients
consisted of 11 men (61%) and seven females (39%), while healthy individuals included 14 (50%) males and
14 (50%) females. Sixty-seven percent of patients were under 50, 17% between 51 and 60, and 17% over 61,
compared to healthy individuals who were 61% under 50, 7% between 51 and 60, and 32% over 60. GBM
patients showed higher neutrophil and monocyte counts (median 81% (63.9, 83.5) and 4.2% (3.8-7.3)),
respectively, and lower lymphocyte counts (median 13.4% (8.8, 28.40)) compared to controls. The median
values of aspartate transaminase (AST), alanine transaminase (ALT), and alkaline phosphatase (ALP) showed
no significant differences between the control and GBM groups. GBM patients had significantly higher
median CRP levels of 2.55 (1.6, 98) than controls. Analysis of databases revealed a high prevalence of
mutations in TP53, with splice region variants, missense variants, and intron variants being the most
common. VEGFA and CTH also displayed mutations, primarily missense and intron variants. Gene
expression analysis showed significantly higher levels of TP53 and VEGFA in GBM patients compared to
controls. CTH expression also exhibited a slight increase in GBM patients. Sanger sequencing identified
three mutations in the TP53 gene, including a novel mutation (11915C>A) not previously reported in
external databases. Additionally, novel mutations were found in the VEGFA (841G>GA, 919T>TG) and CTH
(28398A>AC, 28399A>AT) genes.
Conclusions
This study highlights the immune dysregulation, inflammation, and genetic variations in GBM. The findings
emphasize the potential importance of the TP53, VEGFA, and CTH genes as targets for therapies and
diagnostic biomarkers of GBM. Further study is necessary to comprehend these genetic variations'
functional implications and their use in personalized GBM treatment.
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